6TPN Membrane Protein date Dec 13, 2019
title Crystal Structure Of The Orexin-2 Receptor In Complex With H 2.61 A Resolution
authors M.Rappas, A.Ali, K.A.Bennett, J.D.Brown, S.J.Bucknell, M.Congreve R.M.Cooke, G.Cseke, C.De Graaf, A.S.Dore, J.C.Errey, A.Jazayeri, F.H.Marshall, J.S.Mason, R.Mould, J.C.Patel, B.G.Tehan, M.Weir, J.A.Christopher
compound source
Molecule: Orexin Receptor Type 2,Glga Glycogen Synthase,Ore Receptor Type 2;
Chain: A
Synonym: Ox2r,Hypocretin Receptor Type 2,Glycogen Synthase, Hypocretin Receptor Type 2;
Engineered: Yes
Organism_scientific: Homo Sapiens, Pyrococcus Abyssi (Strai Orsay);
Organism_common: Human
Organism_taxid: 9606, 272844
Gene: Hcrtr2, Pab2292
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
symmetry Space Group: C 2 2 21
R_factor 0.214 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
90.945 173.950 78.327 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.61 Å
ligand NO3, NU8, OLA, PG4, YCM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (6tpn.pdb1.gz) 178 Kb
  • LPC: Ligand-Protein Contacts for 6TPN
  • CSU: Contacts of Structural Units for 6TPN
  • Structure Factors (289 Kb)
  • Retrieve 6TPN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6TPN from S2C, [Save to disk]
  • View 6TPN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6TPN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6tpn from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6tpn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6TPN
  • Community annotation for 6TPN at PDBWiki (http://pdbwiki.org)

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