OCA Atlas for 6UTH

6UTH

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
2, K, V, I, Z, 1, J, L, X, M, Y, H, N, W
A, O, C, S, B, P, Q, F, T, G, U, E, R, D
d, b, c, e, a, f, g

Primary reference

Allosteric coupling between alpha-rings of the 20S proteasome., Yu Z, Yu Y, Wang F, Myasnikov AG, Coffino P, Cheng Y, Nat Commun. 2020 Sep 11;11(1):4580. doi: 10.1038/s41467-020-18415-7. PMID:32917864

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1039 Kb) [Save to disk]

Biological Unit Coordinates (6uth.pdb1.gz) 1035 Kb

CSU: Contacts of Structural Units for 6UTH

Retrieve 6UTH in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 6UTH from S2C, [Save to disk]

View 6UTH in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6uth_1] [6uth_2] [6uth_A] [6uth_B] [6uth_C] [6uth_D] [6uth_E] [6uth_F] [6uth_G] [6uth_H] [6uth_I] [6uth_J] [6uth_K] [6uth_L] [6uth_M] [6uth_N] [6uth_O] [6uth_P] [6uth_Q] [6uth_R] [6uth_S] [6uth_T] [6uth_U] [6uth_V] [6uth_W] [6uth_X] [6uth_Y] [6uth_Z] [6uth_a] [6uth_b] [6uth_c] [6uth_d] [6uth_e] [6uth_f] [6uth_g]

SWISS-PROT database:

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