6V3N	Gene Regulation	date	Nov 26, 2019
title	Crystal Structure Of Cdyl2 In Complex With H3k27me3
authors	S.Qin, W.Tempel, C.H.Arrowsmith, C.Bountra, A.M.Edwards, J.Min, St Genomics Consortium, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Chromodomain Y-Like Protein 2 Chain: A, B Fragment: Chromodomain Synonym: Cdy-Like 2, Cdyl2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cdyl2 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Ace-Gln-Leu-Ala-Thr-Lys-Ala-Ala-Arg-M3l-Ser-Ala-P Thr-Tyr-Nh2; Chain: C, D Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
symmetry	Space Group: P 43 2 2	R_factor 0.240 R_Free 0.258
crystal cell	length a length b length c angle alpha angle beta angle gamma 60.792 60.792 178.600 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	M3L, NH2, UNX	enzyme
Primary reference	Structural Basis for the Binding Selectivity of Human CDY Chromodomains., Dong C, Liu Y, Lyu TJ, Beldar S, Lamb KN, Tempel W, Li Y, Li Z, James LI, Qin S, Wang Y, Min J, Cell Chem Biol. 2020 May 26. pii: S2451-9456(20)30153-7. doi:, 10.1016/j.chembiol.2020.05.007. PMID:32470319

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (6v3n.pdb1.gz) 27 Kb Biological Unit Coordinates (6v3n.pdb2.gz) 27 Kb LPC: Ligand-Protein Contacts for 6V3N CSU: Contacts of Structural Units for 6V3N Structure Factors (2066 Kb) Retrieve 6V3N in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6V3N from S2C, [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6v3n_C] [6v3n_A] [6v3n_D] [6v3n_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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