6VZK Transferase date Feb 28, 2020
title Crystal Structure Of Human Camkii-Alpha (Camk2a)Kinase Domai
authors C.Ozden, M.M.Stratton, S.C.Garman
compound source
Molecule: Calciumcalmodulin-Dependent Protein Kinase Type Alpha;
Chain: A
Synonym: Camk-II Subunit Alpha
Ec: 2.7.11.17
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Camk2a, Camka, Kiaa0968
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
symmetry Space Group: P 21 21 21
R_factor 0.210 R_Free 0.294
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.147 56.928 97.461 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.55 Å
ligand HC4 enzyme Transferase E.C.2.7.11.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCharacterization of CaMKIIalpha holoenzyme stability., Torres-Ocampo AP, Ozden C, Hommer A, Gardella A, Lapinskas E, Samkutty A, Esposito E, Garman S, Stratton M, Protein Sci. 2020 Apr 13. doi: 10.1002/pro.3869. PMID:32282091
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (6vzk.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 6VZK
  • CSU: Contacts of Structural Units for 6VZK
  • Structure Factors (261 Kb)
  • Retrieve 6VZK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6VZK from S2C, [Save to disk]
  • View 6VZK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6VZK
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6vzk from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6vzk_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6VZK
  • Community annotation for 6VZK at PDBWiki (http://pdbwiki.org)

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