6Y43 Immune System date Feb 19, 2020
title Fibrinogen-Like Globe Domain Of Human Angptl6
authors J.A.Coker, T.Krojer, J.M.Mutisya, C.H.Arrowsmith, C.Bountra, K.S. W.W.Yue, B.D.Marsden, Structural Genomics Consortium (Sgc)
compound source
Molecule: Angiopoietin-Related Protein 6
Chain: A
Synonym: Angiopoietin-Like Protein 6,Angiopoietin-Related G Factor,Angiopoietin-Related Protein 5;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Angptl6, Agf, Arp5, Unq152pro178
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Cydisco
symmetry Space Group: P 21 21 21
R_factor 0.172 R_Free 0.208
length a length b length c angle alpha angle beta angle gamma
39.382 65.111 76.306 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand CA, EDO, EPE enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (6y43.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 6Y43
  • CSU: Contacts of Structural Units for 6Y43
  • Structure Factors (1069 Kb)
  • Retrieve 6Y43 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6Y43 from S2C, [Save to disk]
  • View 6Y43 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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  • Visual 3D analysis of 6Y43
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6y43 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6y43_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6Y43
  • Community annotation for 6Y43 at PDBWiki (http://pdbwiki.org)

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