OCA Atlas for 6ZJJ

6ZJJ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
1, Y, Z
5, 3, 7, S, 4, U, V, W, X, 6, T, 2
N, I, Q, P, A, R, B, J, H, M, D, G, F, E, K, C, O, L

Primary reference

Structural Insights into Lactococcal Siphophage p2 Baseplate Activation Mechanism., Spinelli S, Tremblay D, Moineau S, Cambillau C, Goulet A, Viruses. 2020 Aug 11;12(8). pii: v12080878. doi: 10.3390/v12080878. PMID:32796652

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (199 Kb) [Save to disk]

Biological Unit Coordinates (6zjj.pdb1.gz) 197 Kb

CSU: Contacts of Structural Units for 6ZJJ

Retrieve 6ZJJ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 6ZJJ from S2C, [Save to disk]

View 6ZJJ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6zjj_1] [6zjj_2] [6zjj_3] [6zjj_4] [6zjj_5] [6zjj_6] [6zjj_7] [6zjj_A] [6zjj_B] [6zjj_C] [6zjj_D] [6zjj_E] [6zjj_F] [6zjj_G] [6zjj_H] [6zjj_I] [6zjj_J] [6zjj_K] [6zjj_L] [6zjj_M] [6zjj_N] [6zjj_O] [6zjj_P] [6zjj_Q] [6zjj_R] [6zjj_S] [6zjj_T] [6zjj_U] [6zjj_V] [6zjj_W] [6zjj_X] [6zjj_Y] [6zjj_Z]

SWISS-PROT database:

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]