1AW6 Transcription Regulation date Oct 10, 1997
title Gal4 (Cd), Nmr, 24 Structures
authors J.D.Baleja, G.Wagner
compound source
Molecule: Gal4 (Cd)
Chain: A
Fragment: Dna-Binding Domain
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Xa-90
methodSolution NMR
ligand CD enzyme
note 1AW6 supersedes 125D
related structures by homologous chain: 1CLD
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRefined solution structure of the DNA-binding domain of GAL4 and use of 3J(113Cd,1H) in structure determination., Baleja JD, Thanabal V, Wagner G, J Biomol NMR 1997 Dec;10(4):397-401. PMID:9460244
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (295 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 1AW6
  • CSU: Contacts of Structural Units for 1AW6
  • Original NMR restraints for 1AW6 from PDB
  • Retrieve 1AW6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AW6 from S2C, [Save to disk]
  • View 1AW6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AW6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1AW6, from MSDmotif at EBI
  • Genome occurence of 1AW6's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1aw6__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1aw6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1aw6] [1aw6_A]
  • SWISS-PROT database: [P04386]
  • Domain organization of [GAL4_YEAST] by SWISSPFAM
  • Domain found in 1AW6: [GAL4 ] by SMART
  • Other resources with information on 1AW6
  • Community annotation for 1AW6 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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