1BDB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase from a PCB degrader at 2.0 A resolution., Hulsmeyer M, Hecht HJ, Niefind K, Hofer B, Eltis LD, Timmis KN, Schomburg D, Protein Sci 1998 Jun;7(6):1286-93. PMID:9655331
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (1bdb.pdb1.gz) 168 Kb
  • LPC: Ligand-Protein Contacts for 1BDB
  • CSU: Contacts of Structural Units for 1BDB
  • Likely Quarternary Molecular Structure file(s) for 1BDB
  • Structure Factors (173 Kb)
  • Retrieve 1BDB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BDB from S2C, [Save to disk]
  • Re-refined 1bdb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1BDB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bdb] [1bdb_A]
  • SWISS-PROT database: [P47227]

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