OCA Atlas for 1CVJ

1CVJ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

A, AMP

enzyme

note

1CVJ (Molecule of the Month:pdb106)

Gene
Ontology

Chain	Function	Process	Component
G, B, A, E, H, D, C, F

Primary reference

Recognition of polyadenylate RNA by the poly(A)-binding protein., Deo RC, Bonanno JB, Sonenberg N, Burley SK, Cell 1999 Sep 17;98(6):835-45. PMID:10499800

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (231 Kb) [Save to disk]

Biological Unit Coordinates (1cvj.pdb1.gz) 33 Kb

Biological Unit Coordinates (1cvj.pdb2.gz) 30 Kb

Biological Unit Coordinates (1cvj.pdb3.gz) 32 Kb

Biological Unit Coordinates (1cvj.pdb4.gz) 31 Kb

Biological Unit Coordinates (1cvj.pdb5.gz) 33 Kb

Biological Unit Coordinates (1cvj.pdb6.gz) 27 Kb

Biological Unit Coordinates (1cvj.pdb7.gz) 32 Kb

Biological Unit Coordinates (1cvj.pdb8.gz) 27 Kb

LPC: Ligand-Protein Contacts for 1CVJ

CSU: Contacts of Structural Units for 1CVJ

Likely Quarternary Molecular Structure file(s) for 1CVJ

Retrieve 1CVJ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1CVJ from S2C, [Save to disk]

View 1CVJ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1cvj] [1cvj_A] [1cvj_B] [1cvj_C] [1cvj_D] [1cvj_E] [1cvj_F] [1cvj_G] [1cvj_H] [1cvj_M] [1cvj_N] [1cvj_O] [1cvj_P] [1cvj_Q] [1cvj_R] [1cvj_S] [1cvj_T]

SWISS-PROT database: [P11940]

Domain found in 1CVJ: [RRM ] by SMART

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