1DAR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GDP enzyme
note 1DAR (Molecule of the Month:pdb81)
related structures by homologous chain: 2BM0, 2BM1
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of elongation factor G in complex with GDP: conformational flexibility and nucleotide exchange., al-Karadaghi S, Aevarsson A, Garber M, Zheltonosova J, Liljas A, Structure 1996 May 15;4(5):555-65. PMID:8736554
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (1dar.pdb1.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 1DAR
  • CSU: Contacts of Structural Units for 1DAR
  • Likely Quarternary Molecular Structure file(s) for 1DAR
  • Retrieve 1DAR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DAR from S2C, [Save to disk]
  • View 1DAR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dar] [1dar_A]
  • SWISS-PROT database: [Q5SHN5]
  • Domains found in 1DAR: [EFG_C] [EFG_IV ] by SMART

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