1DI8	Transferase	date	Nov 29, 1999
title	The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex [3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
authors	L.Shewchuk, A.Hassell, L.F.Kuyper
compound		source
Molecule: Cyclin-Dependent Kinase 2 Chain: A Synonym: Cdk2 Ec: 2.7.1.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Unidentified Baculovirus Expression_system_taxid: 10469 Expression_system_cell: T.Ni
symmetry	Space Group: P 21 21 21	R_factor 0.186 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.752 74.076 54.005 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	DTQ BindingDB	enzyme	Transferase E.C.2.7.1 BRENDA
related structures	by homologous chain: 1KE5, 1W0X
Gene Ontology	Chain Function Process Component A
Primary reference	Binding mode of the 4-anilinoquinazoline class of protein kinase inhibitor: X-ray crystallographic studies of 4-anilinoquinazolines bound to cyclin-dependent kinase 2 and p38 kinase., Shewchuk L, Hassell A, Wisely B, Rocque W, Holmes W, Veal J, Kuyper LF, J Med Chem 2000 Jan 13;43(1):133-8. PMID:10633045

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (1di8.pdb1.gz) 49 Kb LPC: Ligand-Protein Contacts for 1DI8 CSU: Contacts of Structural Units for 1DI8 Likely Quarternary Molecular Structure file(s) for 1DI8 Structure Factors (140 Kb) Retrieve 1DI8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DI8 from S2C, [Save to disk] Re-refined 1di8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1DI8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1DI8

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1DI8, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1di8a_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1di8] [1di8_A] SWISS-PROT database: [P24941] Domain organization of [CDK2_HUMAN] by SWISSPFAM Domain found in 1DI8: [S_TKc ] by SMART

Other resources with information on 1DI8

Community annotation for 1DI8 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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