1DL0 Toxin date Dec 08, 1999
title Solution Structure Of The Insecticidal Neurotoxin J- Atracotoxin-Hv1c
authors X.H.Wang, G.F.King
compound source
Molecule: J-Atracotoxin-Hv1c
Chain: A
Engineered: Yes
Synthetic: Yes
Other_details: This Sequence Occurs Naturally In The Spider, Hadronyche Versuta. The Peptide Was Chemically Synthesized For Nmr Studies Using Standard T-Boc Chemistry And Oxidizedfolded In A Glutathione Redox Buffer.
methodSolution NMR
subcellular loc. Membrane localization by OPM: Secreted
out side
in side
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery and characterization of a family of insecticidal neurotoxins with a rare vicinal disulfide bridge., Wang X, Connor M, Smith R, Maciejewski MW, Howden ME, Nicholson GM, Christie MJ, King GF, Nat Struct Biol 2000 Jun;7(6):505-13. PMID:10881200
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1DL0
  • Original NMR restraints for 1DL0 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1DL0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DL0 from S2C, [Save to disk]
  • View 1DL0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1DL0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1DL0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dl0a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1dl0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dl0_A] [1dl0]
  • SWISS-PROT database: [P82228]
  • Domain organization of [TJT1C_HADVE] by SWISSPFAM
  • Other resources with information on 1DL0
  • Community annotation for 1DL0 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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