1DYP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CD, CL, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe kappa-carrageenase of P. carrageenovora features a tunnel-shaped active site: a novel insight in the evolution of Clan-B glycoside hydrolases., Michel G, Chantalat L, Duee E, Barbeyron T, Henrissat B, Kloareg B, Dideberg O, Structure. 2001 Jun;9(6):513-25. PMID:11435116
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (1dyp.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 1DYP
  • CSU: Contacts of Structural Units for 1DYP
  • Likely Quarternary Molecular Structure file(s) for 1DYP
  • Retrieve 1DYP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DYP from S2C, [Save to disk]
  • View 1DYP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dyp_A] [1dyp]
  • SWISS-PROT database: [P43478]

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