1E6F	Receptor	date	Aug 15, 2000
title	Human Mir-Receptor, Repeat 11
authors	R.Von Buelow, K.R.Rajashankar, M.Dauter, Z.Dauter, S.Grimme, B.Sc K.Von Figura, I.Uson
compound		source
Molecule: Cation-Independent Mannose-6-Phosphate Receptor Chain: A, B Fragment: Igf-II-Binding Domain, Repeat 11, Residues 1508-1 Synonym: Mannose-6-Phosphate Receptor, Insulin-Like Growth- Receptor, Ci Man-6-P Receptor, Ci-Mpr, 300 Kda Mannose 6-Ph Receptor, Mpr 300; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell_line: Bhk-21 Organ: Kidney Cell: Fibroblast Cellular_location: Lysosome Expression_system: Cricetinae Gen. Sp. Expression_system_taxid: 36483
symmetry	Space Group: P 21 21 21	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.500 49.000 120.400 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.75 Å
related structures	by homologous chain: 1GP0, 1GQB
Gene Ontology	Chain Function Process Component A, B
Primary reference	Locating the anomalous scatterer substructures in halide and sulfur phasing., Uson I, Schmidt B, von Bulow R, Grimme S, von Figura K, Dauter M, Rajashankar KR, Dauter Z, Sheldrick GM, Acta Crystallogr D Biol Crystallogr. 2003 Jan;59(Pt 1):57-66. Epub 2002, Dec 19. PMID:12499540

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (1e6f.pdb1.gz) 23 Kb Biological Unit Coordinates (1e6f.pdb2.gz) 23 Kb CSU: Contacts of Structural Units for 1E6F Likely Quarternary Molecular Structure file(s) for 1E6F Structure Factors (472 Kb) Retrieve 1E6F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1E6F from S2C, [Save to disk] Re-refined 1e6f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1E6F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1E6F

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1E6F, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1e6fa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1e6fb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1e6f] [1e6f_B] [1e6f_A] SWISS-PROT database: [P11717] Belongs to the mannose 6-phosphate receptor (m6pr) family according to TCDB. Domain organization of [MPRI_HUMAN] by SWISSPFAM

Other resources with information on 1E6F

Community annotation for 1E6F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---