1EVT Growth Factor Growth Factor Receptor date Apr 20, 2000
title Crystal Structure Of Fgf1 In Complex With The Extracellular Ligand Binding Domain Of Fgf Receptor 1 (Fgfr1)
authors A.N.Plotnikov, S.R.Hubbard, J.Schlessinger, M.Mohammadi
compound source
Molecule: Protein (Fibroblast Growth Factor 1)
Chain: A, B
Fragment: The B-Trefoil Core Of Fibroblast Growth Factor 1 (Fgf1);
Synonym: Fgf1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Bacteria
Expression_system_common: Eubacteria
Expression_system_taxid: 2

Molecule: Protein (Fibroblast Growth Factor Receptor 1)
Chain: C, D
Fragment: Extracellular Ligand Binding Domain Of Fgf Receptor 1 (Fgfr1) Consisting Of Immunoglobulin Like Domains II (D2) And III (D3);
Synonym: Fgfr1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Bacteria
Expression_system_common: Eubacteria
Expression_system_taxid: 2
symmetry Space Group: P 1
R_factor 0.249 R_Free 0.300
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.553 64.061 64.139 93.40 111.17 97.18
method X-Ray Diffractionresolution 2.80 Å
ligand SO4 enzyme
related structures by homologous chain: 1AFC, 1CVS, 1E0O
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structures of two FGF-FGFR complexes reveal the determinants of ligand-receptor specificity., Plotnikov AN, Hubbard SR, Schlessinger J, Mohammadi M, Cell 2000 May 12;101(4):413-24. PMID:10830168
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (1evt.pdb1.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 1EVT
  • CSU: Contacts of Structural Units for 1EVT
  • Likely Quarternary Molecular Structure file(s) for 1EVT
  • Retrieve 1EVT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EVT from S2C, [Save to disk]
  • View 1EVT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EVT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EVT, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1evta_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1evtb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1evtc1, region C:147-250 [Jmol] [rasmolscript] [script source]
        - Domain d1evtc2, region C:251-359 [Jmol] [rasmolscript] [script source]
        - Domain d1evtd1, region D:147-250 [Jmol] [rasmolscript] [script source]
        - Domain d1evtd2, region D:251-359 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1evt_B] [1evt_C] [1evt] [1evt_D] [1evt_A]
  • SWISS-PROT database: [P05230] [P11362]
  • Belongs to the basigin (basigin) family according to TCDB.
  • Domain organization of [FGF1_HUMAN] [FGFR1_HUMAN] by SWISSPFAM
  • Domains found in 1EVT: [FGF] [IGc2 ] by SMART
  • Other resources with information on 1EVT
  • Community annotation for 1EVT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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