1F80 Transferase date Jun 28, 2000
title Holo-(Acyl Carrier Protein) Synthase In Complex With Holo-(A Carrier Protein)
authors K.D.Parris, L.Lin, A.Tam, R.Mathew, J.Hixon, M.Stahl, C.C.Fritz, J. W.S.Somers
compound source
Molecule: Holo-(Acyl Carrier Protein) Synthase
Chain: A, B, C
Ec: 2.7.8.7
Engineered: Yes
Mutation: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbad

Molecule: Acyl Carrier Protein
Chain: D, E, F
Engineered: Yes

Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p-1
symmetry Space Group: C 2 2 21
R_factor 0.222 R_Free 0.279
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.458 122.032 136.767 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand NA, PN2 enzyme Transferase E.C.2.7.8.7 BRENDA
related structures by homologous chain: 1F7T, 1HY8, 1L0H
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


F, D, E


Primary referenceCrystal structures of substrate binding to Bacillus subtilis holo-(acyl carrier protein) synthase reveal a novel trimeric arrangement of molecules resulting in three active sites., Parris KD, Lin L, Tam A, Mathew R, Hixon J, Stahl M, Fritz CC, Seehra J, Somers WS, Structure Fold Des 2000 Aug 15;8(8):883-95. PMID:10997907
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (1f80.pdb1.gz) 90 Kb
  • LPC: Ligand-Protein Contacts for 1F80
  • CSU: Contacts of Structural Units for 1F80
  • Likely Quarternary Molecular Structure file(s) for 1F80
  • Retrieve 1F80 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1F80 from S2C, [Save to disk]
  • View 1F80 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1F80
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1F80, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f80a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1f80b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1f80c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1f80d_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1f80e_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1f80f_, region F [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1f80_B] [1f80_C] [1f80_E] [1f80_F] [1f80] [1f80_D] [1f80_A]
  • SWISS-PROT database: [P96618] [P80643]
  • Domain organization of [ACPS_BACSU] [ACP_BACSU] by SWISSPFAM
  • Other resources with information on 1F80
  • Community annotation for 1F80 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science