Data retrieval |
- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (63 Kb) [Save to disk]
- Biological Unit Coordinates (1fd3.pdb1.gz) 31 Kb
- Biological Unit Coordinates (1fd3.pdb2.gz) 30 Kb
- LPC: Ligand-Protein Contacts for 1FD3
- CSU: Contacts of Structural Units for 1FD3
- Likely Quarternary Molecular Structure file(s) for 1FD3
- Structure Factors (197 Kb)
- Retrieve 1FD3 in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 1FD3
from S2C,
[Save to disk]
- Re-refined 1fd3 structure
from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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View 1FD3 in 3D |
-
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
E. Martz.
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Visual 3D analysis of 1FD3 |
- Ramachandran
plot from PDBSum
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Structure-derived information |
- Conformational Epitope Prediction for 1FD3 1FD3A 1FD3B 1FD3C 1FD3D from the CEP Server.
- Dipole moment, from Dipole Server at Weizmann Institute
- 3D motif for 1FD3,
from MSDmotif at EBI
- Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1fd3a_, region A
[Jmol]
[rasmolscript]
[script source] - Domain d1fd3b_, region B
[Jmol]
[rasmolscript]
[script source] - Domain d1fd3c_, region C
[Jmol]
[rasmolscript]
[script source] - Domain d1fd3d_, region D
[Jmol]
[rasmolscript]
[script source]
- Class (fold), Architecture (subfold), Topology, Homologous superfamily from
CATH
- Summaries and structural analyses of PDB data files from
PDBSum
- Identification of Protein Pockets & Cavities at
CASTp
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Sequence-derived information |
- View one-letter amino acid or nucleotide sequence for each chain: [1fd3_C] [1fd3_D] [1fd3_A] [1fd3] [1fd3_B]
- SWISS-PROT database: [O15263]
- Belongs to the pore-forming -defensin (-defensin) family
according to TCDB.
- Domain organization of [DEFB2_HUMAN] by SWISSPFAM
- Domain found in 1FD3: [DEFSN
] by SMART
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Other resources with information on 1FD3 |
- Community annotation for 1FD3 at PDBWiki (http://pdbwiki.org)
- MMDB (Entrez's Structure Database)
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Movements, Movies and Images |
- Domain movements in
1FD3 from the Database of
Macromolecular Movements.
- Images
from IMB Jena Image Library
of Biological Macromolecules.
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