1FIY Complex (Lyase Inhibitor) date May 02, 1998
title Three-Dimensional Structure Of Phosphoenolpyruvate Carboxyla Escherichia Coli At 2.8 A Resolution
authors Y.Kai, H.Matsumura, T.Inoue, K.Terada, Y.Nagara, T.Yoshinaga, A.Ki K.Izui
compound source
Molecule: Phosphoenolpyruvate Carboxylase
Chain: A
Synonym: Pepc
Ec: 4.1.1.31
Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
symmetry Space Group: I 2 2 2
R_factor
R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
117.600 248.400 82.700 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand ASP enzyme Lyase E.C.4.1.1.31 BRENDA
related structures by homologous chain: 1QB4
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree-dimensional structure of phosphoenolpyruvate carboxylase: a proposed mechanism for allosteric inhibition., Kai Y, Matsumura H, Inoue T, Terada K, Nagara Y, Yoshinaga T, Kihara A, Tsumura K, Izui K, Proc Natl Acad Sci U S A 1999 Feb 2;96(3):823-8. PMID:9927652
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (1fiy.pdb1.gz) 544 Kb
  • LPC: Ligand-Protein Contacts for 1FIY
  • CSU: Contacts of Structural Units for 1FIY
  • Likely Quarternary Molecular Structure file(s) for 1FIY
  • Retrieve 1FIY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FIY from S2C, [Save to disk]
  • View 1FIY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FIY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FIY, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fiy__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fiy_A] [1fiy]
  • SWISS-PROT database: [P00864]
  • Domain organization of [CAPP_ECOLI] by SWISSPFAM
  • Other resources with information on 1FIY
  • Community annotation for 1FIY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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