1FMK CRYSTAL STRUCTURE OF HUMAN TYROSINE-PROTEIN KINASE C-SRC date
authors Xu, W., Harrison, S.C., Eck, M.J.
compound source
symmetry
R_factor
R_Free 0.2640000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand PTR enzyme
related structures by homologous chain: 1SHA, 2SRC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree-dimensional structure of the tyrosine kinase c-Src., Xu W, Harrison SC, Eck MJ, Nature 1997 Feb 13;385(6617):595-602. PMID:9024657
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk]
  • Biological Unit Coordinates (1fmk.pdb1.gz) 81 Kb
  • LPC: Ligand-Protein Contacts for 1FMK
  • CSU: Contacts of Structural Units for 1FMK
  • Likely Quarternary Molecular Structure file(s) for 1FMK
  • Retrieve 1FMK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FMK from S2C, [Save to disk]
  • View 1FMK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FMK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1FMK from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FMK, from MSDmotif at EBI
  • Genome occurence of 1FMK's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fmk_2, region 146-248 [Jmol] [rasmolscript] [script source]
        - Domain d1fmk_3, region 249-533 [Jmol] [rasmolscript] [script source]
        - Domain d1fmk_1, region 82-145 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fmk] [1fmk_A]
  • SWISS-PROT database: [P12931]
  • Domain organization of [SRC_HUMAN] by SWISSPFAM
  • Domains found in 1FMK: [SH2] [SH3] [TyrKc ] by SMART
  • Other resources with information on 1FMK
  • Community annotation for 1FMK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1FMK from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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