1GOM	Hydrolase	date	Oct 22, 2001
title	Thermostable Xylanase I From Thermoascus Aurantiacus- Crysta
authors	L.Lo Leggio, R.W.Pickersgill
compound		source
Molecule: Endo-1,4-Beta-Xylanase Chain: A Synonym: Xylanase, 1,4-Beta-D-Xylan Xylanohydrolase Ec: 3.2.1.8		Organism_scientific: Thermoascus Aurantiacus Organism_taxid: 5087
symmetry	Space Group: P 1 21 1	R_factor 0.147 R_Free 0.191
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.039 68.302 41.440 90.00 113.87 90.00
method	X-Ray Diffraction	resolution	1.92 Å
ligand	PCA	enzyme	Hydrolase E.C.3.2.1.8 BRENDA
note	1GOM supersedes 1TIX
related structures	by homologous chain: 1B3X, 1GOO
Gene Ontology	Chain Function Process Component A
Primary reference	Substrate specificity and subsite mobility in T. aurantiacus xylanase 10A., Lo Leggio L, Kalogiannis S, Eckert K, Teixeira SC, Bhat MK, Andrei C, Pickersgill RW, Larsen S, FEBS Lett 2001 Dec 7;509(2):303-8. PMID:11741607

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk] Biological Unit Coordinates (1gom.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 1GOM CSU: Contacts of Structural Units for 1GOM Likely Quarternary Molecular Structure file(s) for 1GOM Retrieve 1GOM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1GOM from S2C, [Save to disk]

View 1GOM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1GOM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1GOM, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1goma_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1gom] [1gom_A] SWISS-PROT database: [P23360] Domain organization of [XYNA_THEAU] by SWISSPFAM Domain found in 1GOM: [Glyco_10 ] by SMART

Other resources with information on 1GOM

Community annotation for 1GOM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---