1GP3	Receptor	date	Oct 29, 2001
title	Human Igf2r Domain 11
authors	J.Brown, R.M.Esnouf, M.A.Jones, J.Linnell, K.Harlos, A.B.Hassan, E
compound		source
Molecule: Cation-Independent Mannose-6-Phosphate Receptor Chain: A Fragment: Igf-II Binding Domain Repeat 11 Residues 1508-165 Synonym: Insulin-Like Growth Factor II Receptor, Ci Man-6-P Receptor, Ci-Mpr, 300 Kda Mannose 6-Phosphate Receptor, Mpr Mpr300; Engineered: Yes Other_details: Residues Visible In The Electron Density Map Correspond To Mature Igf2r Residue Numbers 1515 -1647, With Exception Of Residues 1618 - 1621 Where The Density Is Not		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Atcc: 95661 Tissue: Placenta Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_variant: Origami Expression_system_plasmid: Pet22b
symmetry	Space Group: P 21 21 21	R_factor 0.206 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 31.373 49.843 83.030 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.95 Å
related structures	by homologous chain: 1GQB
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of a functional IGF2R fragment determined from the anomalous scattering of sulfur., Brown J, Esnouf RM, Jones MA, Linnell J, Harlos K, Hassan AB, Jones EY, EMBO J 2002 Mar 1;21(5):1054-62. PMID:11867533

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk] Biological Unit Coordinates (1gp3.pdb1.gz) 22 Kb CSU: Contacts of Structural Units for 1GP3 Likely Quarternary Molecular Structure file(s) for 1GP3 Structure Factors (63 Kb) Retrieve 1GP3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1GP3 from S2C, [Save to disk] Re-refined 1gp3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1GP3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1GP3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1GP3, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1gp3a_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1gp3_A] [1gp3] SWISS-PROT database: [P11717] Belongs to the mannose 6-phosphate receptor (m6pr) family according to TCDB. Domain organization of [MPRI_HUMAN] by SWISSPFAM

Other resources with information on 1GP3

Community annotation for 1GP3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---