1GZ8	Transferase	date	May 17, 2002
title	Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 6-(3'-Methyl-2'-Oxo)Butoxypurine
authors	T.Davies, J.Endicott, L.Johnson, M.Noble, J.Tucker
compound		source
Molecule: Cell Division Protein Kinase 2 Chain: A Synonym: P33 Protein Kinase, Cyclin-Dependent Protein Kinas Ec: 2.7.1.37 Engineered: Yes Other_details: Complex With Cyclin A Or Cyclin E		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 21 21 21	R_factor 0.151 R_Free 0.185
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.860 71.070 71.840 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.30 Å
ligand	CSD, MBP	enzyme	Transferase E.C.2.7.1.37 BRENDA
note	1GZ8 is a representative structure
related structures	by homologous chain: 1JVP
Gene Ontology	Chain Function Process Component A
Primary reference	Probing the ATP ribose-binding domain of cyclin-dependent kinases 1 and 2 with O(6)-substituted guanine derivatives., Gibson AE, Arris CE, Bentley J, Boyle FT, Curtin NJ, Davies TG, Endicott JA, Golding BT, Grant S, Griffin RJ, Jewsbury P, Johnson LN, Mesguiche V, Newell DR, Noble ME, Tucker JA, Whitfield HJ, J Med Chem 2002 Aug 1;45(16):3381-93. PMID:12139449

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk] Biological Unit Coordinates (1gz8.pdb1.gz) 107 Kb LPC: Ligand-Protein Contacts for 1GZ8 CSU: Contacts of Structural Units for 1GZ8 Likely Quarternary Molecular Structure file(s) for 1GZ8 Structure Factors (442 Kb) Retrieve 1GZ8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1GZ8 from S2C, [Save to disk] Re-refined 1gz8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1GZ8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1GZ8

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1GZ8 from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1GZ8, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1gz8a_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1gz8_A] [1gz8] SWISS-PROT database: [P24941] Domain organization of [CDK2_HUMAN] by SWISSPFAM Domain found in 1GZ8: [S_TKc ] by SMART

Other resources with information on 1GZ8

Community annotation for 1GZ8 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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