1JVP	Transferase	date	Aug 31, 2001
title	Crystal Structure Of Human Cdk2 (Unphosphorylated) In Comple Pkf049-365
authors	J.M.Rondeau
compound		source
Molecule: Cell Division Protein Kinase 2 Chain: P Synonym: P33 Protein Kinase Ec: 2.7.1.37 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: H5 (Trichoplusia Ni) Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 21 21 21	R_factor 0.206 R_Free 0.253
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.528 71.802 72.362 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.53 Å
ligand	89E, LIG	enzyme	Transferase E.C.2.7.1.37 BRENDA
related structures	by homologous chain: 1GZ8, 1H00
Gene Ontology	Chain Function Process Component P
Primary reference	Structure-based design and protein X-ray analysis of a protein kinase inhibitor., Furet P, Meyer T, Strauss A, Raccuglia S, Rondeau JM, Bioorg Med Chem Lett 2002 Jan 21;12(2):221-4. PMID:11755359

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk] Biological Unit Coordinates (1jvp.pdb1.gz) 54 Kb LPC: Ligand-Protein Contacts for 1JVP CSU: Contacts of Structural Units for 1JVP Likely Quarternary Molecular Structure file(s) for 1JVP Structure Factors (393 Kb) Retrieve 1JVP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JVP from S2C, [Save to disk] Re-refined 1jvp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JVP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JVP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JVP, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jvpp_, region P [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jvp_P] [1jvp] SWISS-PROT database: [P24941] Domain organization of [CDK2_HUMAN] by SWISSPFAM Domain found in 1JVP: [S_TKc ] by SMART

Other resources with information on 1JVP

Community annotation for 1JVP at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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