1H6R	Luminescent Protein	date	Jun 22, 2001
title	The Oxidized State Of A Redox Sensitive Variant Of Green Flu Protein
authors	H.Ostergaard, A.Henriksen, F.G.Hansen, J.R.Winther
compound		source
Molecule: Green Fluorescent Protein Chain: A, B, C Synonym: Gfp Engineered: Yes Mutation: Yes		Organism_scientific: Aequorea Victoria Organism_common: Jellyfish Organism_taxid: 6100 Organ: Photogenic Organ Tissue: Circumoral Ring Canal Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet24 Other_details: Synthetic Gene
symmetry	Space Group: P 21 21 21	R_factor 0.183 R_Free 0.212
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.864 93.915 140.551 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	CL, PIA	enzyme
related structures	by homologous chain: 1JBZ, 1S6Z
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Shedding light on disulfide bond formation: engineering a redox switch in green fluorescent protein., Ostergaard H, Henriksen A, Hansen FG, Winther JR, EMBO J 2001 Nov 1;20(21):5853-62. PMID:11689426

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk] Biological Unit Coordinates (1h6r.pdb1.gz) 44 Kb Biological Unit Coordinates (1h6r.pdb2.gz) 44 Kb Biological Unit Coordinates (1h6r.pdb3.gz) 44 Kb LPC: Ligand-Protein Contacts for 1H6R CSU: Contacts of Structural Units for 1H6R Likely Quarternary Molecular Structure file(s) for 1H6R Structure Factors (797 Kb) Retrieve 1H6R in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1H6R from S2C, [Save to disk] Re-refined 1h6r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1H6R in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1H6R

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1H6R 1H6RA 1H6RB 1H6RC from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1H6R, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1h6ra_, region A [Jmol] [rasmolscript] [script source]     - Domain d1h6rb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1h6rc_, region C [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1h6r_C] [1h6r_B] [1h6r_A] [1h6r] SWISS-PROT database: [P42212] Domain organization of [GFP_AEQVI] by SWISSPFAM

Other resources with information on 1H6R

Community annotation for 1H6R at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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