1II4	Growth Factor Growth Factor Receptor	date	Apr 20, 2001
title	Crystal Structure Of Ser252trp Apert Mutant Fgf Receptor 2 ( Complex With Fgf2
authors	O.A.Ibrahimi, A.V.Eliseenkova, A.N.Plotnikov, D.M.Ornitz, M.Moha
compound		source
Molecule: Heparin-Binding Growth Factor 2 Chain: A, B, C, D Synonym: Fgf2, Hbgf-2, Basic Fibroblast Growth Factor, Bfgf Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-28a
Molecule: Fibroblast Growth Factor Receptor 2 Chain: E, F, G, H Fragment: Extracellular Ligand Binding Domain Consisting Of Domains II (D2) And III (D3), Residues 147-366; Synonym: Fgfr2, Keratinocyte Growth Factor Receptor Ec: 2.7.1.112 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-28a
symmetry	Space Group: P 1	R_factor 0.238 R_Free 0.267
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.970 72.657 89.739 89.98 89.70 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand		enzyme	Transferase E.C.2.7.1.112 BRENDA
related structures	by homologous chain: 1CVS, 1DJS, 2BFH
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structural basis for fibroblast growth factor receptor 2 activation in Apert syndrome., Ibrahimi OA, Eliseenkova AV, Plotnikov AN, Yu K, Ornitz DM, Mohammadi M, Proc Natl Acad Sci U S A 2001 Jun 19;98(13):7182-7. PMID:11390973

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (208 Kb) [Save to disk] Biological Unit Coordinates (1ii4.pdb1.gz) 54 Kb Biological Unit Coordinates (1ii4.pdb2.gz) 54 Kb Biological Unit Coordinates (1ii4.pdb3.gz) 53 Kb Biological Unit Coordinates (1ii4.pdb4.gz) 54 Kb CSU: Contacts of Structural Units for 1II4 Likely Quarternary Molecular Structure file(s) for 1II4 Retrieve 1II4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1II4 from S2C, [Save to disk]

View 1II4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1II4

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1II4, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ii4a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1ii4b_, region B [Jmol] [rasmolscript] [script source]     - Domain d1ii4c_, region C [Jmol] [rasmolscript] [script source]     - Domain d1ii4d_, region D [Jmol] [rasmolscript] [script source]     - Domain d1ii4e1, region E:150-250 [Jmol] [rasmolscript] [script source]     - Domain d1ii4e2, region E:251-361 [Jmol] [rasmolscript] [script source]     - Domain d1ii4f1, region F:150-250 [Jmol] [rasmolscript] [script source]     - Domain d1ii4f2, region F:251-361 [Jmol] [rasmolscript] [script source]     - Domain d1ii4g1, region G:150-250 [Jmol] [rasmolscript] [script source]     - Domain d1ii4g2, region G:251-361 [Jmol] [rasmolscript] [script source]     - Domain d1ii4h1, region H:150-250 [Jmol] [rasmolscript] [script source]     - Domain d1ii4h2, region H:251-361 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ii4_C] [1ii4_E] [1ii4_D] [1ii4_A] [1ii4_G] [1ii4_F] [1ii4] [1ii4_B] [1ii4_H] SWISS-PROT database: [P09038] [P21802] Belongs to the fibroblast growth factor 2 (fgf2) family according to TCDB. Domain organization of [FGF2_HUMAN] [FGFR2_HUMAN] by SWISSPFAM Domains found in 1II4: [FGF] [IGc2 ] by SMART

Other resources with information on 1II4

Community annotation for 1II4 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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