1IJP Hydrolase date Apr 27, 2001
title Solution Structure Of Ala20propro64ala Substituted Subunit Escherichia Coli Atp Synthase
authors O.Y.Dmitriev, R.H.Fillingame
compound source
Molecule: Atp Synthase
Chain: A
Fragment: Subunit C
Ec: 3.6.1.34
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Unce
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jh613
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbr322
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.1.34 BRENDA
related structures by homologous chain: 1C99
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of Ala(20) --> Pro/Pro(64) --> Ala substituted subunit c of Escherichia coli ATP synthase in which the essential proline is switched between transmembrane helices., Dmitriev OY, Fillingame RH, J Biol Chem 2001 Jul 20;276(29):27449-54. PMID:11331283
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (203 Kb) [Save to disk]
  • Biological Unit Coordinates (1ijp.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1IJP
  • Retrieve 1IJP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IJP from S2C, [Save to disk]
  • View 1IJP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IJP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1IJP, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ijpa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1ijp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ijp] [1ijp_A]
  • SWISS-PROT database: [P68699]
  • Belongs to the h(+)- or na(+)-translocating f-type, v-type and a-type atpase (f-atpase) superfamily according to TCDB.
  • Domain organization of [ATPL_ECOLI] by SWISSPFAM
  • Other resources with information on 1IJP
  • Community annotation for 1IJP at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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