1C99 Proton Transport, Hydrolase date Apr 30, 1999
title Asp61 Deprotonated Form Of Subunit C Of The F1fo Atp Synthas Escherichia Coli
authors V.K.Rastogi, M.E.Girvin
compound source
Molecule: Proteolipid F1fo Of Atp Synthase
Chain: A
Fragment: Subunit C
Synonym: Proteolipid, Dccd-Binding Protein
Ec: 3.6.1.34
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Strain: Er
Cellular_location: Membrane
Gene: Unce
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Er
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.1.34 BRENDA
related structures by homologous chain: 1C17, 1IJP
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural changes linked to proton translocation by subunit c of the ATP synthase., Rastogi VK, Girvin ME, Nature 1999 Nov 18;402(6759):263-8. PMID:10580496
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (182 Kb) [Save to disk]
  • Biological Unit Coordinates (1c99.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 1C99
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1C99 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1C99 from S2C, [Save to disk]
  • View 1C99 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1C99
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1C99, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1c99a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1c99 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1c99] [1c99_A]
  • SWISS-PROT database: [P68699]
  • Belongs to the h(+)- or na(+)-translocating f-type, v-type and a-type atpase (f-atpase) superfamily according to TCDB.
  • Domain organization of [ATPL_ECOLI] by SWISSPFAM
  • Other resources with information on 1C99
  • Community annotation for 1C99 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1C99 from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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