1C17	A1C12 SUBCOMPLEX OF F1FO ATP SYNTHASE	date
authors	Rastogi, V.K., Girvin, M.E.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
note	1C17 (Molecule of the Month:pdb72)is a representative structure
related structures	by homologous chain: 1C0V, 1C99
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L M
Primary reference	Structural changes linked to proton translocation by subunit c of the ATP synthase., Rastogi VK, Girvin ME, Nature 1999 Nov 18;402(6759):263-8. PMID:10580496

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (282 Kb) [Save to disk] Biological Unit Coordinates (1c17.pdb1.gz) 271 Kb CSU: Contacts of Structural Units for 1C17 Experimental data, such as chemical shifts, at BioMagResBank (BMRB) NMR Restraints Grid from BioMagResBank (BMRB) Retrieve 1C17 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1C17 from S2C, [Save to disk]

View 1C17 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1C17

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1C17, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1c17a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1c17b_, region B [Jmol] [rasmolscript] [script source]     - Domain d1c17c_, region C [Jmol] [rasmolscript] [script source]     - Domain d1c17d_, region D [Jmol] [rasmolscript] [script source]     - Domain d1c17e_, region E [Jmol] [rasmolscript] [script source]     - Domain d1c17f_, region F [Jmol] [rasmolscript] [script source]     - Domain d1c17g_, region G [Jmol] [rasmolscript] [script source]     - Domain d1c17h_, region H [Jmol] [rasmolscript] [script source]     - Domain d1c17i_, region I [Jmol] [rasmolscript] [script source]     - Domain d1c17j_, region J [Jmol] [rasmolscript] [script source]     - Domain d1c17k_, region K [Jmol] [rasmolscript] [script source]     - Domain d1c17l_, region L [Jmol] [rasmolscript] [script source]     - Domain d1c17m_, region M [Jmol] [rasmolscript] [script source] Fold representative 1c17 from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1c17_J] [1c17_A] [1c17] [1c17_D] [1c17_H] [1c17_L] [1c17_K] [1c17_F] [1c17_M] [1c17_B] [1c17_G] [1c17_E] [1c17_C] [1c17_I] SWISS-PROT database: [P0AB98] [P68699] Belongs to the h(+)- or na(+)-translocating f-type, v-type and a-type atpase (f-atpase) superfamily according to TCDB. Domain organization of [ATP6_ECOLI] [ATPL_ECOLI] by SWISSPFAM

Other resources with information on 1C17

Community annotation for 1C17 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1C17 from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---