1JS3	Lyase	date	Aug 16, 2001
title	Crystal Structure Of Dopa Decarboxylase In Complex With The Carbidopa
authors	P.Burkhard, P.Dominici, C.Borri-Voltattorni, J.N.Jansonius, V.N.Malashkevich
compound		source
Molecule: Dopa Decarboxylase Chain: A, B Synonym: Aromatic-L-Amino-Acid Decarboxylase; Ddc Ec: 4.1.1.28 Engineered: Yes		Organism_scientific: Sus Scrofa Organism_common: Pig Organism_taxid: 9823 Organ: Kidney Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm109 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pkkddc(Delta)4
symmetry	Space Group: P 62	R_factor 0.144 R_Free 0.187
crystal cell	length a length b length c angle alpha angle beta angle gamma 154.360 154.360 86.780 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.25 Å
ligand	142, PLP, SO4	enzyme	Lyase E.C.4.1.1.28 BRENDA
note	1JS3 is a representative structure
related structures	by homologous chain: 1JS6
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural insight into Parkinson's disease treatment from drug-inhibited DOPA decarboxylase., Burkhard P, Dominici P, Borri-Voltattorni C, Jansonius JN, Malashkevich VN, Nat Struct Biol 2001 Nov;8(11):963-7. PMID:11685243

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk] Biological Unit Coordinates (1js3.pdb1.gz) 155 Kb LPC: Ligand-Protein Contacts for 1JS3 CSU: Contacts of Structural Units for 1JS3 Likely Quarternary Molecular Structure file(s) for 1JS3 Structure Factors (450 Kb) Retrieve 1JS3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JS3 from S2C, [Save to disk] Re-refined 1js3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JS3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JS3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JS3, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1js3a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1js3b_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1js3_B] [1js3_A] [1js3] SWISS-PROT database: [P80041] Domain organization of [DDC_PIG] by SWISSPFAM

Other resources with information on 1JS3

Community annotation for 1JS3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---