1KB2 | Transcription Dna | date | Nov 05, 2001 |
||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
title | Crystal Structure Of Vdr Dna-Binding Domain Bound To Mouse O (Spp) Response Element | ||||||||||||||
authors | P.L.Shaffer, D.T.Gewirth | ||||||||||||||
compound | source | ||||||||||||||
Molecule: 5'-D(Cpapcpgpgptptpcpapcpgpapgpgpt -3'; Chain: C Engineered: Yes Other_details: Mouse Osteopontin (Spp) Response Element |
Synthetic: Yes | ||||||||||||||
Molecule: 5'-D(Tpgpapapcpcptpcpgptpgpapapcpc -3'; Chain: D Engineered: Yes Other_details: Mouse Osteopontin (Spp) Response Element |
Synthetic: Yes | ||||||||||||||
Molecule: Vitamin D3 Receptor Chain: A, B Fragment: Dna-Binding Domain (Residues 16-125) Synonym: Vdr, 1,25-Dihydroxyvitamin D3 Receptor Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Vdr Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11a-Vdr-N1-Rplks | ||||||||||||||
symmetry | Space Group: P 43 21 2 |
| |||||||||||||
crystal cell |
| ||||||||||||||
method | X-Ray Diffraction | resolution | 2.70 Å | ||||||||||||
ligand | ZN | enzyme |
| ||||||||||||
note | 1KB2 (Molecule of the Month:pdb155) | ||||||||||||||
related structures | by homologous chain: 1KB4, 1KB6 | ||||||||||||||
Gene Ontology |
| ||||||||||||||
Primary reference | Structural basis of VDR-DNA interactions on direct repeat response elements., Shaffer PL, Gewirth DT, EMBO J 2002 May 1;21(9):2242-52. PMID:11980721 |
Data retrieval |
View 1KB2 in 3D |
Visual 3D analysis of 1KB2 |
Structure-derived information |
- Domain d1kb2a_, region A [Jmol] [rasmolscript] [script source] - Domain d1kb2b_, region B [Jmol] [rasmolscript] [script source] - Domain d1p1kb2, region B:323-437 [Jmol] [rasmolscript] [script source] - Domain d1w1kb2, region B:6-273 [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
Other resources with information on 1KB2 |
Movements, Movies and Images |
OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |