1MBN Oxygen Storage date Apr 05, 1973
title The Stereochemistry Of The Protein Myoglobin
authors H.C.Watson, J.C.Kendrew
compound source
Molecule: Myoglobin
Chain: A
Engineered: Yes
Organism_scientific: Physeter Catodon
Organism_common: Sperm Whale
Organism_taxid: 9755
symmetry Space Group: P 1 21 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.500 30.900 34.700 90.00 106.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand HEM, OH enzyme
note 1MBN (Molecule of the Month:pdb1, pdb142)
related structures by homologous chain: 106M, 1YMC
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (1mbn.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 1MBN
  • CSU: Contacts of Structural Units for 1MBN
  • Likely Quarternary Molecular Structure file(s) for 1MBN
  • Retrieve 1MBN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MBN from S2C, [Save to disk]
  • View 1MBN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MBN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1MBN, from MSDmotif at EBI
  • Genome occurence of 1MBN's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mbn__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1mbn from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mbn] [1mbn_A]
  • SWISS-PROT database: [P02185]
  • Domain organization of [MYG_PHYCA] by SWISSPFAM
  • Other resources with information on 1MBN
  • Community annotation for 1MBN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1MBN from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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