1O4X date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
note 1O4X (Molecule of the Month:pdb112)
related structures by homologous chain: 1HRZ, 1J46, 1POG
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMolecular basis for synergistic transcriptional activation by Oct1 and Sox2 revealed from the solution structure of the 42-kDa Oct1.Sox2.Hoxb1-DNA ternary transcription factor complex., Williams DC Jr, Cai M, Clore GM, J Biol Chem 2004 Jan 9;279(2):1449-57. Epub 2003 Oct 14. PMID:14559893
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (1o4x.pdb1.gz) 84 Kb
  • CSU: Contacts of Structural Units for 1O4X
  • Original NMR restraints for 1O4X from PDB
  • Retrieve 1O4X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1O4X from S2C, [Save to disk]
  • View 1O4X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1o4x_D] [1o4x_C] [1o4x] [1o4x_A] [1o4x_B]
  • SWISS-PROT database: [P14859] [P48431]
  • Domains found in 1O4X: [HMG] [HOX] [POU ] by SMART

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