OCA Atlas for 1ODS

1ODS

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, MG

enzyme

related structures

by homologous chain: 1ODT

Gene
Ontology

Chain	Function	Process	Component
C, H, D, F, G, E, A, B

Primary reference

Multifunctional xylooligosaccharide/cephalosporin C deacetylase revealed by the hexameric structure of the Bacillus subtilis enzyme at 1.9A resolution., Vincent F, Charnock SJ, Verschueren KH, Turkenburg JP, Scott DJ, Offen WA, Roberts S, Pell G, Gilbert HJ, Davies GJ, Brannigan JA, J Mol Biol 2003 Jul 11;330(3):593-606. PMID:12842474

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (436 Kb) [Save to disk]

Biological Unit Coordinates (1ods.pdb1.gz) 331 Kb

Biological Unit Coordinates (1ods.pdb2.gz) 322 Kb

LPC: Ligand-Protein Contacts for 1ODS

CSU: Contacts of Structural Units for 1ODS

Likely Quarternary Molecular Structure file(s) for 1ODS

Structure Factors (3629 Kb)

Retrieve 1ODS in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1ODS from S2C, [Save to disk]

Re-refined 1ods structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1ODS in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ods] [1ods_A] [1ods_B] [1ods_C] [1ods_D] [1ods_E] [1ods_F] [1ods_G] [1ods_H]

SWISS-PROT database: [P94388]

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