1OYP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
related structures by homologous chain: 1OYS
Gene
Ontology
ChainFunctionProcessComponent
B, F, C, D, A, E
  • 3'-5'-exoribonuclease activi...


  • Primary referenceCrystal structure of the phosphorolytic exoribonuclease RNase PH from Bacillus subtilis and implications for its quaternary structure and tRNA binding., Harlow LS, Kadziola A, Jensen KF, Larsen S, Protein Sci 2004 Mar;13(3):668-77. Epub 2004 Feb 6. PMID:14767080
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (209 Kb) [Save to disk]
  • Biological Unit Coordinates (1oyp.pdb1.gz) 204 Kb
  • LPC: Ligand-Protein Contacts for 1OYP
  • CSU: Contacts of Structural Units for 1OYP
  • Likely Quarternary Molecular Structure file(s) for 1OYP
  • Structure Factors (283 Kb)
  • Retrieve 1OYP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OYP from S2C, [Save to disk]
  • Re-refined 1oyp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OYP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oyp] [1oyp_A] [1oyp_B] [1oyp_C] [1oyp_D] [1oyp_E] [1oyp_F]
  • SWISS-PROT database: [P28619]

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