1R10	Transport Protein	date	Sep 23, 2003
title	Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) N Binding Domain One (Nbd1) With Atp, I4122 Space Group
authors	H.A.Lewis, S.G.Buchanan, S.K.Burley, K.Conners, M.Dickey, M.Dorwa R.Fowler, X.Gao, W.B.Guggino, W.A.Hendrickson
compound		source
Molecule: Cystic Fibrosis Transmembrane Conductance Regulat Chain: A, B Fragment: Nbd1 Domain (Residues 389-673) Synonym: Cftr, Camp- Dependent Chloride Channel Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Cftr Or Abcc7 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet26b
symmetry	Space Group: I 41 2 2	R_factor 0.228 R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma 141.200 141.200 279.460 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	ACY, ATP, MG	enzyme
related structures	by homologous chain: 1XF9
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure of nucleotide-binding domain 1 of the cystic fibrosis transmembrane conductance regulator., Lewis HA, Buchanan SG, Burley SK, Conners K, Dickey M, Dorwart M, Fowler R, Gao X, Guggino WB, Hendrickson WA, Hunt JF, Kearins MC, Lorimer D, Maloney PC, Post KW, Rajashankar KR, Rutter ME, Sauder JM, Shriver S, Thibodeau PH, Thomas PJ, Zhang M, Zhao X, Emtage S, EMBO J 2004 Jan 28;23(2):282-93. Epub 2003 Dec 18. PMID:14685259

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk] Biological Unit Coordinates (1r10.pdb1.gz) 41 Kb Biological Unit Coordinates (1r10.pdb2.gz) 41 Kb Biological Unit Coordinates (1r10.pdb3.gz) 309 Kb LPC: Ligand-Protein Contacts for 1R10 CSU: Contacts of Structural Units for 1R10 Likely Quarternary Molecular Structure file(s) for 1R10 Structure Factors (454 Kb) Retrieve 1R10 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1R10 from S2C, [Save to disk] Re-refined 1r10 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1R10 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1R10

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1R10, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1r10a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1r10b_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1r10] [1r10_B] [1r10_A] SWISS-PROT database: [P26361] Domain organization of [CFTR_MOUSE] by SWISSPFAM Domain found in 1R10: [AAA ] by SMART

Other resources with information on 1R10

Community annotation for 1R10 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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