1RSC Lyase (Carbon-Carbon) date Mar 29, 1994
title Structure Of An Effector Induced Inactivated State Of Ribulo Bisphosphate Carboxylase(Slash)Oxygenase: The Binary Comple Enzyme And Xylulose Bisphosphate
authors J.Newman, S.Gutteridge
compound source
Molecule: Ribulose 1,5 Bisphosphate Carboxylaseoxygenase ( Chain);
Chain: A, B, C, D, E, F, G, H
Ec: 4.1.1.39
Engineered: Yes
Organism_scientific: Synechococcus Elongatus
Organism_taxid: 269084
Strain: Pcc 6301
Cell_line: S2

Molecule: Ribulose 1,5 Bisphosphate Carboxylaseoxygenase ( Chain);
Chain: M, I, N, J, O, K, P, L
Ec: 4.1.1.39
Engineered: Yes

Organism_scientific: Synechococcus Elongatus
Organism_taxid: 269084
Strain: Pcc 6301
Cell_line: S2
symmetry Space Group: P 21 21 21
R_factor 0.255 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
224.400 112.600 200.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand XBP enzyme Lyase E.C.4.1.1.39 BRENDA
related structures by homologous chain: 1RBL, 1RCO, 1UPP
Gene
Ontology
ChainFunctionProcessComponent
F, E, C, A, B, H, D, G


N, K, M, L, J, O, P, I


Primary referenceStructure of an effector-induced inactivated state of ribulose 1,5-bisphosphate carboxylase/oxygenase: the binary complex between enzyme and xylulose 1,5-bisphosphate., Newman J, Gutteridge S, Structure 1994 Jun 15;2(6):495-502. PMID:7922027
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (742 Kb) [Save to disk]
  • Biological Unit Coordinates (1rsc.pdb1.gz) 735 Kb
  • LPC: Ligand-Protein Contacts for 1RSC
  • CSU: Contacts of Structural Units for 1RSC
  • Likely Quarternary Molecular Structure file(s) for 1RSC
  • Retrieve 1RSC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RSC from S2C, [Save to disk]
  • View 1RSC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RSC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RSC, from MSDmotif at EBI
  • Genome occurence of 1RSC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rsca1, region A:148-475 [Jmol] [rasmolscript] [script source]
        - Domain d1rsca2, region A:9-147 [Jmol] [rasmolscript] [script source]
        - Domain d1rscm_, region M [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rsc_B] [1rsc_P] [1rsc_A] [1rsc_M] [1rsc_I] [1rsc_F] [1rsc_K] [1rsc_N] [1rsc_G] [1rsc_L] [1rsc_C] [1rsc_E] [1rsc] [1rsc_H] [1rsc_J] [1rsc_O] [1rsc_D]
  • SWISS-PROT database: [P00880] [P04716]
  • Domain organization of [RBL_SYNP6] [RBS_SYNP6] by SWISSPFAM
  • Domain found in 1RSC: [RuBisCO_small ] by SMART
  • Other resources with information on 1RSC
  • Community annotation for 1RSC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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