1TYH Transcription date Jul 07, 2004
title Crystal Structure Of Transcriptional Activator Tena From Bac Subtilis
authors S.Eswaramoorthy, S.Swaminathan, S.K.Burley, New York Sgx Resear For Structural Genomics (Nysgxrc)
compound source
Molecule: Transcriptional Activator Tena
Chain: A, B, D, E
Engineered: Yes
 Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Gene: Tena, Bsu11650
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41
R_factor 0.244 R_Free 0.304
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.430 58.430 297.540 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.54 Å
ligand MSE enzyme
related structures by homologous chain: 1YAF, 1YAK
Gene
Ontology
ChainFunctionProcessComponent
A, D, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk]
  • Biological Unit Coordinates (1tyh.pdb1.gz) 144 Kb
  • LPC: Ligand-Protein Contacts for 1TYH
  • CSU: Contacts of Structural Units for 1TYH
  • Likely Quarternary Molecular Structure file(s) for 1TYH
  • Retrieve 1TYH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TYH from S2C, [Save to disk]
    • View 1TYH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1TYH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TYH, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tyha_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1tyhb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1tyhd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1tyhe_, region E [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tyh_D] [1tyh_E] [1tyh] [1tyh_A] [1tyh_B]
  • SWISS-PROT database: [P25052]
  • Domain organization of [TENA_BACSU] by SWISSPFAM
    • Other resources with information on 1TYH
  • Community annotation for 1TYH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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