1U0F Isomerase date Jul 13, 2004
title Crystal Structure Of Mouse Phosphoglucose Isomerase In Compl Glucose 6-Phosphate
authors J.T.G.Solomons, E.M.Zimmerly, S.Burns, N.Krishnamurthy, M.K.Swan S.Krings, H.Muirhead, J.Chirgwin, C.Davies
compound source
Molecule: Glucose-6-Phosphate Isomerase
Chain: A, B
Synonym: Gpi, Phosphoglucose Isomerase, Pgi, Phosphohexose Phi, Neuroleukin, Nlk;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Gpi
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21de3plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet5a
symmetry Space Group: P 1 21 1
R_factor 0.178 R_Free 0.207
length a length b length c angle alpha angle beta angle gamma
69.400 116.800 73.900 90.00 101.60 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand BME, G6P, G6Q, GOL, SO4 enzyme Isomerase E.C. BRENDA
related structures by homologous chain: 1U0E
A, B
  • glucose-6-phosphate isomeras...
  • cytokine activity
  • growth factor activity

  • Primary referenceThe crystal structure of mouse phosphoglucose isomerase at 1.6A resolution and its complex with glucose 6-phosphate reveals the catalytic mechanism of sugar ring opening., Graham Solomons JT, Zimmerly EM, Burns S, Krishnamurthy N, Swan MK, Krings S, Muirhead H, Chirgwin J, Davies C, J Mol Biol. 2004 Sep 17;342(3):847-60. PMID:15342241
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (199 Kb) [Save to disk]
  • Biological Unit Coordinates (1u0f.pdb1.gz) 193 Kb
  • LPC: Ligand-Protein Contacts for 1U0F
  • CSU: Contacts of Structural Units for 1U0F
  • Likely Quarternary Molecular Structure file(s) for 1U0F
  • Structure Factors (1532 Kb)
  • Retrieve 1U0F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U0F from S2C, [Save to disk]
  • Re-refined 1u0f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1U0F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1U0F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U0F, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1u0fa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1u0fb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u0f_B] [1u0f_A] [1u0f]
  • SWISS-PROT database: [P06745]
  • Domain organization of [G6PI_MOUSE] by SWISSPFAM
  • Other resources with information on 1U0F
  • Community annotation for 1U0F at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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