1U0T Signaling Protein, Transferase date Jul 14, 2004
title Crystal Structure Of Mycobacterium Tuberculosis Nad Kinase
authors S.Garavaglia, N.Raffaelli, L.Finaurini, G.Magni, M.Rizzi, Tb Stru Genomics Consortium (Tbsgc)
compound source
Molecule: Inorganic Polyphosphateatp-Nad Kinase
Chain: A, B
Synonym: Polyp, Atp Nad Kinase
Ec: 2.7.1.23
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Ppnk
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.226 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.757 145.655 68.713 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand
enzyme Transferase E.C.2.7.1.23 BRENDA
related structures by homologous chain: 1Y3I
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA novel fold revealed by mycobacterium tuberculosis NAD kinase, a key allosteric enzyme in NADP biosynthesis., Garavaglia S, Raffaelli N, Finaurini L, Magni G, Rizzi M, J Biol Chem 2004 Jul 21;. PMID:15269221
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk]
  • Biological Unit Coordinates (1u0t.pdb1.gz) 171 Kb
  • CSU: Contacts of Structural Units for 1U0T
  • Likely Quarternary Molecular Structure file(s) for 1U0T
  • Retrieve 1U0T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U0T from S2C, [Save to disk]
  • View 1U0T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1U0T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U0T, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1u0ta_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1u0tb_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u0t_A] [1u0t_B] [1u0t]
  • SWISS-PROT database: [P0A5S6]
  • Domain organization of [PPNK_MYCTU] by SWISSPFAM
  • Other resources with information on 1U0T
  • Community annotation for 1U0T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science