1UV6 Glycoprotein date Jan 15, 2004
title X-Ray Structure Of Acetylcholine Binding Protein (Achbp) In With Carbamylcholine
authors P.H.N.Celie, S.E.Van Rossum-Fikkert, W.J.Van Dijk, K.Brejc, A.B. T.K.Sixma
compound source
Molecule: Acetylcholine-Binding Protein
Chain: A, B, C, D, E, F, G, H, I, J
Synonym: Ach-Binding Protein, Achbp
Engineered: Yes
Organism_scientific: Lymnaea Stagnalis
Organism_common: Great Pond Snail
Organism_taxid: 6523
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pfastbaci
symmetry Space Group: P 43 21 2
R_factor 0.227 R_Free 0.265
crystal
cell
length a length b length c angle alpha angle beta angle gamma
140.900 140.900 240.412 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand CCE enzyme
note 1UV6 (Molecule of the Month:pdb71)
related structures by homologous chain: 1I9B, 1UX2
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, E, B, H, C, D, I, G


Primary referenceNicotine and carbamylcholine binding to nicotinic acetylcholine receptors as studied in AChBP crystal structures., Celie PH, van Rossum-Fikkert SE, van Dijk WJ, Brejc K, Smit AB, Sixma TK, Neuron 2004 Mar 25;41(6):907-14. PMID:15046723
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (331 Kb) [Save to disk]
  • Biological Unit Coordinates (1uv6.pdb1.gz) 163 Kb
  • Biological Unit Coordinates (1uv6.pdb2.gz) 164 Kb
  • LPC: Ligand-Protein Contacts for 1UV6
  • CSU: Contacts of Structural Units for 1UV6
  • Likely Quarternary Molecular Structure file(s) for 1UV6
  • Retrieve 1UV6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UV6 from S2C, [Save to disk]
  • View 1UV6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UV6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UV6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uv6a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1uv6b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1uv6c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1uv6d_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1uv6e_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1uv6f_, region F [Jmol] [rasmolscript] [script source]
        - Domain d1uv6g_, region G [Jmol] [rasmolscript] [script source]
        - Domain d1uv6h_, region H [Jmol] [rasmolscript] [script source]
        - Domain d1uv6i_, region I [Jmol] [rasmolscript] [script source]
        - Domain d1uv6j_, region J [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uv6_B] [1uv6_G] [1uv6] [1uv6_I] [1uv6_H] [1uv6_E] [1uv6_J] [1uv6_C] [1uv6_D] [1uv6_A] [1uv6_F]
  • SWISS-PROT database: [P58154]
  • Domain organization of [ACHP_LYMST] by SWISSPFAM
  • Other resources with information on 1UV6
  • Community annotation for 1UV6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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