1V10	Oxidase	date	Apr 02, 2004
title	Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Crystals
authors	M.Rizzi, S.Garavaglia, F.Palmieri, A.Cambria
compound		source
Molecule: Laccase Chain: A Ec: 1.10.3.2		Organism_scientific: Rigidoporus Lignosus Organism_taxid: 219653 Atcc: Aj609490
symmetry	Space Group: P 65	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 124.914 124.914 95.117 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	CU	enzyme	Oxidoreductase E.C.1.10.3.2 BRENDA
related structures	by homologous chain: 1GYC
Gene Ontology	Chain Function Process Component A
Primary reference	The structure of Rigidoporus lignosus Laccase containing a full complement of copper ions, reveals an asymmetrical arrangement for the T3 copper pair., Garavaglia S, Cambria MT, Miglio M, Ragusa S, Iacobazzi V, Palmieri F, D'Ambrosio C, Scaloni A, Rizzi M, J Mol Biol. 2004 Oct 1;342(5):1519-31. PMID:15364578

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk] Biological Unit Coordinates (1v10.pdb1.gz) 76 Kb LPC: Ligand-Protein Contacts for 1V10 CSU: Contacts of Structural Units for 1V10 Likely Quarternary Molecular Structure file(s) for 1V10 Retrieve 1V10 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1V10 from S2C, [Save to disk]

View 1V10 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1V10

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1V10, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1v10a1, region A:1-136 [Jmol] [rasmolscript] [script source]     - Domain d1v10a2, region A:137-304 [Jmol] [rasmolscript] [script source]     - Domain d1v10a3, region A:305-494 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1v10_A] [1v10] SWISS-PROT database: [Q6H9H7] Domain organization of [Q6H9H7_9APHY] by SWISSPFAM

Other resources with information on 1V10

Community annotation for 1V10 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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