1WYZ X-Ray structure of the putative methyltransferase from Bacteroides thetaiotaomicron VPI-5482 at the resolution 2.5 A. Norteast Structural Genomics Consortium target Btr28 date
authors Kuzin, A.P., Chen, Y., Forouhar, F., Vorobiev, S.M., Acton, T., Ma, L.C., Xiao, R., Montelione, G.T., Hunt, J.F., Tong, L., NESG, Northeast.Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.293
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (1wyz.pdb1.gz) 73 Kb
  • Biological Unit Coordinates (1wyz.pdb2.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 1WYZ
  • CSU: Contacts of Structural Units for 1WYZ
  • Likely Quarternary Molecular Structure file(s) for 1WYZ
  • Structure Factors (828 Kb)
  • Retrieve 1WYZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WYZ from S2C, [Save to disk]
  • Re-refined 1wyz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1WYZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WYZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WYZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wyz] [1wyz_C] [1wyz_B] [1wyz_A] [1wyz_D]
  • SWISS-PROT database: [Q8A031]
  • Domain organization of [Q8A031_BACTN] by SWISSPFAM
    • Other resources with information on 1WYZ
  • Community annotation for 1WYZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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