1X9L Metal Binding Protein date Aug 23, 2004
title Solution Structure Of Cui-Dr1885 From Deinococcus Radioduran
authors L.Banci, I.Bertini, S.Ciofi-Baffoni, E.Katsari, N.Katsaros, K.Kub Structural Proteomics In Europe (Spine)
compound source
Molecule: Cui-Dr1885
Chain: A
Organism_scientific: Deinococcus Radiodurans
Organism_taxid: 243230
Strain: R1
methodSolution NMR
ligand CU1 enzyme
related structures by homologous chain: 1X7L
Primary referenceA copper(I) protein possibly involved in the assembly of CuA center of bacterial cytochrome c oxidase., Banci L, Bertini I, Ciofi-Baffoni S, Katsari E, Katsaros N, Kubicek K, Mangani S, Proc Natl Acad Sci U S A 2005 Mar 15;102(11):3994-9. Epub 2005 Mar 7. PMID:15753304
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (744 Kb) [Save to disk]
  • Biological Unit Coordinates (1x9l.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 1X9L
  • CSU: Contacts of Structural Units for 1X9L
  • Original NMR restraints for 1X9L from PDB
  • Retrieve 1X9L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X9L from S2C, [Save to disk]
  • View 1X9L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1X9L
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1X9L, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1x9la_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1x9l from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x9l] [1x9l_A]
  • SWISS-PROT database: [Q9RT80]
  • Domain organization of [Q9RT80_DEIRA] by SWISSPFAM
  • Other resources with information on 1X9L
  • Community annotation for 1X9L at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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