1XDM	Lyase	date	Sep 07, 2004
title	Structure Of Human Aldolase B Associated With Hereditary Fructose Intolerance (A149p), At 291k
authors	A.D.Malay, K.N.Allen, D.R.Tolan
compound		source
Molecule: Fructose-Bisphosphate Aldolase B Chain: A, B, C, D, W, X, Y, Z Synonym: Liver-Type Aldolase Ec: 4.1.2.13 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Aldob, Aldb Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh5-Alpha Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-Ap
symmetry	Space Group: P 21 21 2	R_factor 0.271 R_Free 0.319
crystal cell	length a length b length c angle alpha angle beta angle gamma 153.421 153.475 185.553 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	SO4	enzyme	Lyase E.C.4.1.2.13 BRENDA
related structures	by homologous chain: 1XFB
Gene Ontology	Chain Function Process Component A, W, X, Y, B, Z, C, D
Primary reference	Structure of the thermolabile mutant aldolase B, A149P: molecular basis of hereditary fructose intolerance., Malay AD, Allen KN, Tolan DR, J Mol Biol. 2005 Mar 18;347(1):135-44. Epub 2005 Jan 20. PMID:15733923

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (362 Kb) [Save to disk] Biological Unit Coordinates (1xdm.pdb1.gz) 93 Kb Biological Unit Coordinates (1xdm.pdb2.gz) 91 Kb Biological Unit Coordinates (1xdm.pdb3.gz) 91 Kb Biological Unit Coordinates (1xdm.pdb4.gz) 91 Kb LPC: Ligand-Protein Contacts for 1XDM CSU: Contacts of Structural Units for 1XDM Likely Quarternary Molecular Structure file(s) for 1XDM Structure Factors (669 Kb) Retrieve 1XDM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1XDM from S2C, [Save to disk] Re-refined 1xdm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1XDM in 3D

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Visual 3D analysis of 1XDM

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1XDM, from MSDmotif at EBI Fold representative 1xdm from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1xdm_C] [1xdm] [1xdm_D] [1xdm_X] [1xdm_W] [1xdm_Z] [1xdm_Y] [1xdm_A] [1xdm_B] SWISS-PROT database: [P05062] Domain organization of [ALDOB_HUMAN] by SWISSPFAM

Other resources with information on 1XDM

Community annotation for 1XDM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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