OCA Atlas for 1XDQ

1XDQ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MO, MTE, O, URE

enzyme

related structures

by homologous chain: 1XDY

Gene
Ontology

Chain	Function	Process	Component
D, A, E, B, C

Primary reference

Structural and biochemical identification of a novel bacterial oxidoreductase., Loschi L, Brokx SJ, Hills TL, Zhang G, Bertero MG, Lovering AL, Weiner JH, Strynadka NC, J Biol Chem 2004 Nov 26;279(48):50391-400. Epub 2004 Sep 07. PMID:15355966

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (224 Kb) [Save to disk]

Biological Unit Coordinates (1xdq.pdb1.gz) 48 Kb

Biological Unit Coordinates (1xdq.pdb2.gz) 47 Kb

Biological Unit Coordinates (1xdq.pdb3.gz) 48 Kb

Biological Unit Coordinates (1xdq.pdb4.gz) 47 Kb

Biological Unit Coordinates (1xdq.pdb5.gz) 47 Kb

LPC: Ligand-Protein Contacts for 1XDQ

CSU: Contacts of Structural Units for 1XDQ

Likely Quarternary Molecular Structure file(s) for 1XDQ

Structure Factors (454 Kb)

Retrieve 1XDQ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1XDQ from S2C, [Save to disk]

Re-refined 1xdq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1XDQ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1xdq] [1xdq_A] [1xdq_B] [1xdq_C] [1xdq_D] [1xdq_E]

SWISS-PROT database: [P76342]

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