1XOX Apoptosis date Oct 07, 2004
title Solution Structure Of Human Survivin
authors C.Sun, D.Nettesheim, Z.Liu, E.T.Olejniczak
compound source
Molecule: Apoptosis Inhibitor Survivin
Chain: A, B
Fragment: Residues 1-117
Synonym: Baculoviral Iap Repeat-Containing Protein 5; Apopt Inhibitor 4;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Birc5, Api4, Iap4
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
methodSolution NMR
ligand ZN enzyme
related structures by homologous chain: 1M4M
Primary referenceSolution structure of human survivin and its binding interface with Smac/Diablo., Sun C, Nettesheim D, Liu Z, Olejniczak ET, Biochemistry 2005 Jan 11;44(1):11-7. PMID:15628841
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (1xox.pdb1.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 1XOX
  • CSU: Contacts of Structural Units for 1XOX
  • Retrieve 1XOX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XOX from S2C, [Save to disk]
    • View 1XOX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1XOX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XOX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xox_A] [1xox_B] [1xox]
  • SWISS-PROT database: [O15392]
  • Domain organization of [BIRC5_HUMAN] by SWISSPFAM
  • Domain found in 1XOX: [BIR ] by SMART
    • Other resources with information on 1XOX
  • Community annotation for 1XOX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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