1XYZ	Glycosyltransferase	date	Jun 07, 1995
title	A Common Protein Fold And Similar Active Site In Two Distinc Of Beta-Glycanases
authors	P.M.Alzari, S.Spinelli, R.Dominguez
compound		source
Molecule: 1,4-Beta-D-Xylan-Xylanohydrolase Chain: A, B Synonym: Endo-1\,4-Beta-Xylanase Z, Xylanase Xynz Ec: 3.2.1.8 Engineered: Yes		Organism_scientific: Clostridium Thermocellum Organism_taxid: 1515 Strain: Ncib 10682 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Pct1214 (Puc8)
symmetry	Space Group: P 1	R_factor 0.183 R_Free 0.221
crystal cell	length a length b length c angle alpha angle beta angle gamma 47.100 51.100 70.740 100.54 83.79 101.64
method	X-Ray Diffraction	resolution	1.40 Å
ligand		enzyme	Hydrolase E.C.3.2.1.8 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	A common protein fold and similar active site in two distinct families of beta-glycanases., Dominguez R, Souchon H, Spinelli S, Dauter Z, Wilson KS, Chauvaux S, Beguin P, Alzari PM, Nat Struct Biol 1995 Jul;2(7):569-76. PMID:7664125

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk] Biological Unit Coordinates (1xyz.pdb1.gz) 56 Kb Biological Unit Coordinates (1xyz.pdb2.gz) 57 Kb CSU: Contacts of Structural Units for 1XYZ Likely Quarternary Molecular Structure file(s) for 1XYZ Retrieve 1XYZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1XYZ from S2C, [Save to disk]

View 1XYZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1XYZ

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1XYZ 1XYZA 1XYZB from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1XYZ, from MSDmotif at EBI Genome occurence of 1XYZ's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1xyza_, region A [Jmol] [rasmolscript] [script source]     - Domain d1xyzb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1xyz] [1xyz_A] [1xyz_B] SWISS-PROT database: [P10478] Domain organization of [XYNZ_CLOTH] by SWISSPFAM Domain found in 1XYZ: [Glyco_10 ] by SMART

Other resources with information on 1XYZ

Community annotation for 1XYZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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