1YJ6 crystal structure of human glutathione S-transferase M1A-1A complexed with glutathionyl-zinc-trihydroxide date
authors Patskovsky, Y.V., Patskovska, L.N., Listowsky, I., Almo, S.C.
compound source
symmetry
R_factor
R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand GSH, ZN enzyme
related structures by homologous chain: 1XWK, 2GTU
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (1yj6.pdb1.gz) 76 Kb
  • Biological Unit Coordinates (1yj6.pdb2.gz) 77 Kb
  • LPC: Ligand-Protein Contacts for 1YJ6
  • CSU: Contacts of Structural Units for 1YJ6
  • Likely Quarternary Molecular Structure file(s) for 1YJ6
  • Structure Factors (175 Kb)
  • Retrieve 1YJ6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YJ6 from S2C, [Save to disk]
  • Re-refined 1yj6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1YJ6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1YJ6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1YJ6, from MSDmotif at EBI
  • Fold representative 1yj6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yj6] [1yj6_C] [1yj6_B] [1yj6_A]
  • SWISS-PROT database: [P09488]
  • Domain organization of [GSTM1_HUMAN] by SWISSPFAM
  • Other resources with information on 1YJ6
  • Community annotation for 1YJ6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science