2GTU LIGAND-FREE HUMAN GLUTATHIONE S-TRANSFERASE M2-2 (E.C.2.5.1.18), MONOCLINIC CRYSTAL FORM date
authors Patskovska, L.N., Fedorov, A.A., Patskovsky, Y.V., Almo, S.C., Listowsky, I.
compound source
symmetry
R_factor
R_Free 0.2570000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.55
related structures by homologous chain: 1GTU, 1YJ6
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • glutathione peroxidase activ...
  • receptor binding
  • negative regulation of ryano...
  • positive regulation of ryano...

    • Primary referenceThe enhanced affinity for thiolate anion and activation of enzyme-bound glutathione is governed by an arginine residue of human Mu class glutathione S-transferases., Patskovsky YV, Patskovska LN, Listowsky I, J Biol Chem. 2000 Feb 4;275(5):3296-304. PMID:10652317
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (2gtu.pdb1.gz) 75 Kb
  • CSU: Contacts of Structural Units for 2GTU
  • Likely Quarternary Molecular Structure file(s) for 2GTU
  • Structure Factors (107 Kb)
  • Retrieve 2GTU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GTU from S2C, [Save to disk]
  • Re-refined 2gtu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2GTU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2GTU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2GTU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2gtua2, region A:1-84 [Jmol] [rasmolscript] [script source]
        - Domain d2gtua1, region A:85-217 [Jmol] [rasmolscript] [script source]
        - Domain d2gtub2, region B:1-84 [Jmol] [rasmolscript] [script source]
        - Domain d2gtub1, region B:85-217 [Jmol] [rasmolscript] [script source]
  • Fold representative 2gtu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gtu_B] [2gtu_A] [2gtu]
  • SWISS-PROT database: [P28161]
  • Domain organization of [GSTM2_HUMAN] by SWISSPFAM
    • Other resources with information on 2GTU
  • Community annotation for 2GTU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 2GTU from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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