1YJ6	Transferase	date	Jan 13, 2005
title	Crystal Structure Of Human Glutathione S-Transferase M1a-1a With Glutathionyl-Zinc-Trihydroxide
authors	Y.V.Patskovsky, L.N.Patskovska, I.Listowsky, S.C.Almo
compound		source
Molecule: Glutathione S-Transferase Mu 1 Chain: A, B, C Synonym: Gstm1-1, Gst Class-Mu 1, Gstm1a-1a, Gstm1b-1b, Hb Gth4; Ec: 2.5.1.18 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gstm1, Gst1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet3a_hgstm1a
symmetry	Space Group: C 1 2 1	R_factor 0.230 R_Free 0.264
crystal cell	length a length b length c angle alpha angle beta angle gamma 178.640 51.410 93.820 90.00 122.47 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	GSH, ZN	enzyme	Transferase E.C.2.5.1.18 BRENDA
related structures	by homologous chain: 1XWK, 2GTU
Gene Ontology	Chain Function Process Component A, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk] Biological Unit Coordinates (1yj6.pdb1.gz) 75 Kb Biological Unit Coordinates (1yj6.pdb2.gz) 75 Kb LPC: Ligand-Protein Contacts for 1YJ6 CSU: Contacts of Structural Units for 1YJ6 Likely Quarternary Molecular Structure file(s) for 1YJ6 Structure Factors (175 Kb) Retrieve 1YJ6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YJ6 from S2C, [Save to disk] Re-refined 1yj6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YJ6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1YJ6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1YJ6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yj6] [1yj6_C] [1yj6_B] [1yj6_A] SWISS-PROT database: [P09488] Domain organization of [GSTM1_HUMAN] by SWISSPFAM

Other resources with information on 1YJ6

Community annotation for 1YJ6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---